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Revisions to the Classification, Nomenclature, and Diversity of Eukaryotes

Journal Article
Adl, S. M., Bass, D., Lane, C. E., Lukeš, J., Schoch, C. L., Smirnov, A., …Zhang, Q. (2019)
Revisions to the Classification, Nomenclature, and Diversity of Eukaryotes. Journal of Eukaryotic Microbiology, 66(1), 4-119. https://doi.org/10.1111/jeu.12691
This revision of the classification of eukaryotes follows that of Adl et al., 2012 [J. Euk. Microbiol. 59(5)] and retains an emphasis on protists. Changes since have improved ...

Sources and survival of Listeria monocytogenes on fresh, leafy produce

Journal Article
on fresh, leafy produce. Journal of Applied Microbiology, 125(4), 930-942. https://doi.org/10.1111/jam.14025

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on fresh, leafy produce. Journal of Applied Microbiology, 125(4), 930-942. https://doi.org/10.1111/jam.14025
Listeria monocytogenes in an intracellular human pathogen which enters the body through contaminated food stuffs and is known to contaminate fresh leafy produce such as spinac...

Estimating excess length of stay due to healthcare-associated infections: A systematic review and meta-analysis of statistical methodology

Journal Article
Manoukian, S., Stewart, S., Dancer, S., Graves, N., Mason, H., McFarland, A., …Reilly, J. (2018)
Estimating excess length of stay due to healthcare-associated infections: A systematic review and meta-analysis of statistical methodology. Journal of Hospital Infection, https://doi.org/10.1016/j.jhin.2018.06.003
Background Healthcare-associated infection (HAI) affects millions of patients worldwide. HAI is associated with increased healthcare costs, owing primarily to increased hospit...

Quantifying the relative effect of environmental contamination on surgical ward MRSA incidence: An exploratory analysis

Journal Article
Lee, X. J., Pettitt, A. N., & Dancer, S. J. (2018)
Quantifying the relative effect of environmental contamination on surgical ward MRSA incidence: An exploratory analysis. Infection, Disease & Health, https://doi.org/10.1016/j.idh.2018.02.005
Background: To investigate and quantify the contribution of environmental contamination towards methicillin-resistant Staphylococcus aureus (MRSA) incidence observed in a hosp...

Spatial zoning of microbial functions and plant-soil nitrogen dynamics across a riparian area in an extensively grazed livestock system

Journal Article
de Sosa, L. L., Glanville, H. C., Marshall, M. R., Williams, A. P., Abadie, M., Clark, I. M., …Jones, D. L. (2018)
Spatial zoning of microbial functions and plant-soil nitrogen dynamics across a riparian area in an extensively grazed livestock system. Soil Biology and Biochemistry, 120, 153-164. https://doi.org/10.1016/j.soilbio.2018.02.004
Anthropogenic activities have significantly altered global biogeochemical nitrogen (N) cycling leading to major environmental problems such as freshwater eutrophication, biodi...

How Does a Photocatalytic Antimicrobial Coating Affect Environmental Bioburden in Hospitals?

Journal Article
Reid, M., Whatley, V., Spooner, E., Nevill, A. M., Cooper, M., Ramsden, J. J., & Dancer, S. J. (2018)
How Does a Photocatalytic Antimicrobial Coating Affect Environmental Bioburden in Hospitals?. Infection Control and Hospital Epidemiology, 39(4), 398-404. https://doi.org/10.1017/ice.2017.297
BACKGROUND The healthcare environment is recognized as a source for healthcare-acquired infection. Because cleaning practices are often erratic and always intermittent, we hyp...

Evidence for rapid, tide-related shifts in the microbiome of the coral Coelastrea aspera

Journal Article
Sweet, M. J., Brown, B. E., Dunne, R. P., Singleton, I., & Bulling, M. (2017)
Evidence for rapid, tide-related shifts in the microbiome of the coral Coelastrea aspera. Coral Reefs, 36(3), 815-828. https://doi.org/10.1007/s00338-017-1572-y
Shifts in the microbiome of the intertidal coral Coelastrea aspera (formally known as Goniastrea aspera) from Phuket, Thailand were noted over the course of a four day period ...

Isolation of Indigenous Hydrocarbon Transforming Bacteria from Oil Contaminated Soils in Libya: Selection for Use as Potential Inocula for Soil Bioremediation

Journal Article
Hakima, A., & Ian, S. (2017)
Isolation of Indigenous Hydrocarbon Transforming Bacteria from Oil Contaminated Soils in Libya: Selection for Use as Potential Inocula for Soil Bioremediation. International journal of environmental bioremediation & biodegradation, 5(1), 8-17. https://doi.org/10.12691/ijebb-5-1-2
The Libyan oil industry has left a significant legacy of contamination and methods are required to remediate oil-contaminated soils in the area. In this work hydrocarbon utili...

Analysing the effect of soil organic matter on bacterial communities using T-RFLP fingerprinting: different methods, different stories?

Journal Article
Blaud, A., Diouf, F., Herrmann, A. M., & Lerch, T. Z. (2015)
Analysing the effect of soil organic matter on bacterial communities using T-RFLP fingerprinting: different methods, different stories?. Biology and Fertility of Soils, 51(8), 959-971. doi:10.1007/s00374-015-1041-0
Soil microbial ecology needs robust tools to elucidate ecological questions, such as the impact of fertilisation on soil microbial communities. However, the methods and data a...

Dynamics of bacterial communities in relation to soil aggregate formation during the decomposition of 13C-labelled rice straw

Journal Article
Blaud, A., Lerch, T., Chevallier, T., Nunan, N., Chenu, C., & Brauman, A. (2012)
Dynamics of bacterial communities in relation to soil aggregate formation during the decomposition of 13C-labelled rice straw. Applied Soil Ecology, 53, 1-9. https://doi.org/10.1016/j.apsoil.2011.11.005
The addition of fresh organic matter is known to modify both microbial community structure and soil aggregation. The objective of this study was to understand the relationship...