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27 results

Visual techniques to support exploratory analysis of temporal graph data.

Conference Proceeding
Kerracher, N., Kennedy, J., Chalmers, K., & Graham, M. (2015)
Visual techniques to support exploratory analysis of temporal graph data. In E. Bertini, J. Kennedy, & E. Puppo (Eds.), Proceedings of the Eurographics Conference on Visualization (EuroVis '15), Short Papers Track, (103-107). https://doi.org/10.2312/eurovisshort.20151133
Recently, much research has focused on developing techniques for the visual representation of temporal graph data. This paper takes a wider look at the visual techniques invol...

Vesper: Visualising Species Archives.

Journal Article
Graham, M., & Kennedy, J. (2014)
Vesper: Visualising Species Archives. Ecological Informatics, 24, 132-147. https://doi.org/10.1016/j.ecoinf.2014.08.004
Vesper (Visual Exploration of SPEcies-referenced Repositories) is a tool that visualises Darwin Core Archive (DwC-A) datasets, and is aimed at reducing the amount of time and ...

Helium: visualization of large scale plant pedigrees.

Journal Article
Shaw, P., Graham, M., Kennedy, J., Milne, I., & Marshall, D. F. (2014)
Helium: visualization of large scale plant pedigrees. BMC Bioinformatics, 15, https://doi.org/10.1186/1471-2105-15-259
Plant breeders use an increasingly diverse range of data types to identify lines with desirable characteristics suitable to be taken forward in plant breeding programmes. Ther...

Visual cleaning of genotype data.

Conference Proceeding
Kennedy, J., Graham, M., Paterson, T., & Law, A. (2013)
Visual cleaning of genotype data. In Proceedings of BioVis 2013, 105-112. https://doi.org/10.1109/BioVis.2013.6664353
While some data cleaning tasks can be performed automatically, many more require expert human guidance to steer the cleaning process, especially if erroneous or unclean data i...

Pianola - visualization of multivariate time-series security event data.

Conference Proceeding
Thomson, A., Graham, M., & Kennedy, J. (2013)
Pianola - visualization of multivariate time-series security event data. In Proceedings of IV2013, 123-131. https://doi.org/10.1109/IV.2013.15
Monitoring log files for network intrusions is unwieldy. To build a mental model of the log, an analyst is required to recognise continuous timelines and attack patterns from ...

VIPER: a visualisation tool for exploring inheritance inconsistencies in genotyped pedigrees

Journal Article
Paterson, T., Graham, M., Kennedy, J., & Law, A. (2012)
VIPER: a visualisation tool for exploring inheritance inconsistencies in genotyped pedigrees. BMC Bioinformatics, 13/8, https://doi.org/10.1186/1471-2105-13-S8-S5
Pedigree genotype datasets are used for analysing genetic inheritance and to map genetic markers and traits. Such datasets consist of hundreds of related animals genotyped for...

Redeeming pedigree data with an interactive error cleaning visualisation.

Conference Proceeding
Graham, M., Kennedy, J., Paterson, T., & Law, A. (2012)
Redeeming pedigree data with an interactive error cleaning visualisation. In Proceedings of Advanced Visual Interfaces 2012, 741-744. https://doi.org/10.1145/2254556.2254698
We describe a visual data cleansing application for pedigree genotype data, which is used to redeem otherwise unusable pedigree data sets. Biologists and bioinformaticians dyn...

Evaluating the VIPER pedigree visualisation: detecting inheritance inconsistencies in genotyped pedigrees.

Conference Proceeding
Paterson, T., Graham, M., Kennedy, J., & Law, A. (2011)
Evaluating the VIPER pedigree visualisation: detecting inheritance inconsistencies in genotyped pedigrees. In 2011 IEEE Symposium on Biological Data Visualization (BioVis), 119-126. https://doi.org/10.1109/BioVis.2011.6094056
VIPER (Visual Pedigree Explorer) is a tool for exploring large complex animal pedigrees and their associated genotype data. The tool combines a novel, space-efficient visualis...

Visualising errors in animal pedigree genotype data

Journal Article
Graham, M., Kennedy, J., Paterson, T., & Law, A. (2011)
Visualising errors in animal pedigree genotype data. Computer Graphics Forum, 30, 1011-1020. https://doi.org/10.1111/j.1467-8659.2011.01950.x
Genetic analysis of a breeding animal population involves determining the inheritance pattern of genotypes for multiple genetic markers across the individuals in the populatio...

Combined vs. Separate Views in Matrix-based Graph Analysis and Comparison.

Conference Proceeding
Melville, A., Graham, M., & Kennedy, J. (2011)
Combined vs. Separate Views in Matrix-based Graph Analysis and Comparison. In 15th International Conference on Information Visualisation (IV), 2011https://doi.org/10.1109/IV.2011.49
While much work has been done in the area of visualization for analysis of graphs, relatively little research exists into how best to use visualization for comparing graphs. W...

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