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The Prometheus Description Model: an examination of the taxonomic description-building process and its representation

Journal Article
Pullan, M. R., Armstrong, K. E., Paterson, T., Cannon, A., Kennedy, J. B., Watson, M. F., …Raguenaud, C. (2005)
The Prometheus Description Model: an examination of the taxonomic description-building process and its representation. Taxon, 54(3), 751 - 765. https://doi.org/10.2307/25065431
A model for representing taxonomic descriptive data is presented. The model has been developed in response to the growing requirement for the global exchange of descriptive da...

The Prometheus Taxonomic Model: a practical approach to representing multiple classification.

Journal Article
Pullan, M. R., Watson, M. F., Kennedy, J., Raguenaud, C., & Hyam, R. (2000)
The Prometheus Taxonomic Model: a practical approach to representing multiple classification. Taxon, 49, 55-75
A model for representing taxonomic data in a flexible and dynamic system capable of handling and comparing multiple simultaneous classifications is presented. The Prometheus T...

Teallach — a flexible user-interface development environment for object database applications

Journal Article
Barclay, P. J., Griffiths, T., McKirdy, J., Kennedy, J., Cooper, R., Paton, N. W., & Gray, P. (2003)
Teallach — a flexible user-interface development environment for object database applications. Journal of Visual Languages and Computing, 14(1), 47-77. doi:10.1016/s1045-926x(02)00056-3
The Teallach project has adapted model-based user-interface development techniques to the systematic creation of user-interfaces for object-oriented database applications. Mod...

VIPER: a visualisation tool for exploring inheritance inconsistencies in genotyped pedigrees

Journal Article
Paterson, T., Graham, M., Kennedy, J., & Law, A. (2012)
VIPER: a visualisation tool for exploring inheritance inconsistencies in genotyped pedigrees. BMC Bioinformatics, 13/8, https://doi.org/10.1186/1471-2105-13-S8-S5
Pedigree genotype datasets are used for analysing genetic inheritance and to map genetic markers and traits. Such datasets consist of hundreds of related animals genotyped for...

Time-series Explorer: An Animated Information Visualisation for Microarray Time-course Data

Journal Article
Craig, P., Kennedy, J., & Cumming, A. (2005)
Time-series Explorer: An Animated Information Visualisation for Microarray Time-course Data. BMC bioinformatics, 6, P8. doi:10.1186/1471-2105-6-S3-P8
Microarray technologies are a relatively new development that allow biologists to monitor the activity of thousands of genes (normally around 8,000) in parallel across multipl...

Teallach: a model-based user interface development environment for object databases

Journal Article
Griffiths, T., Barclay, P. J., Paton, N. W., McKirdy, J., Kennedy, J., Gray, P., …Pinherio da Silva, P. (2001)
Teallach: a model-based user interface development environment for object databases. Interacting with Computers, 14(1), 31-68. doi:10.1016/s0953-5438(01)00042-x
Model-based user interface development environments show promise for improving the productivity of user-interface developers and possibly for improving the quality of develope...

Pathways for Theoretical Advances in Visualization

Journal Article
Chen, M., Grinstein, G., Johnson, C. R., Kennedy, J., & Tory, M. (2017)
Pathways for Theoretical Advances in Visualization. IEEE Computer Graphics and Applications, 37(4), 103-112. https://doi.org/10.1109/MCG.2017.3271463
There is little doubt that having a theoretic foundation will benefit the field of visualization, including its main subfields: information visualization, scientific visualiza...

Constructing and Evaluating Visualisation Task Classifications: Process and Considerations

Journal Article
Kerracher, N., & Kennedy, J. (2019)
Constructing and Evaluating Visualisation Task Classifications: Process and Considerations. Computer Graphics Forum, 36(3), 47-59. https://doi.org/10.1111/cgf.13167
Categorising tasks is a common pursuit in the visualisation research community, with a wide variety of taxonomies, typologies, design spaces, and frameworks having been develo...

Vesper: Visualising Species Archives.

Journal Article
Graham, M., & Kennedy, J. (2014)
Vesper: Visualising Species Archives. Ecological Informatics, 24, 132-147. https://doi.org/10.1016/j.ecoinf.2014.08.004
Vesper (Visual Exploration of SPEcies-referenced Repositories) is a tool that visualises Darwin Core Archive (DwC-A) datasets, and is aimed at reducing the amount of time and ...

Visualising errors in animal pedigree genotype data

Journal Article
Graham, M., Kennedy, J., Paterson, T., & Law, A. (2011)
Visualising errors in animal pedigree genotype data. Computer Graphics Forum, 30, 1011-1020. https://doi.org/10.1111/j.1467-8659.2011.01950.x
Genetic analysis of a breeding animal population involves determining the inheritance pattern of genotypes for multiple genetic markers across the individuals in the populatio...