Research explorer tool

11 results

Pattern browsing and query adjustment for the exploratory analysis and cooperative visualisation of microarray time-course data.

Conference Proceeding
Craig, P., Cannon, A., Kennedy, J., & Kukla, R. (2010)
Pattern browsing and query adjustment for the exploratory analysis and cooperative visualisation of microarray time-course data. In Y. Luo (Ed.), Cooperative Design, Visualization, and Engineering, 199-206. https://doi.org/10.1007/978-3-642-16066-0_30
This paper presents work to support collaborative visualisation and data analysis in the microarray time-series explorer (MaTSE) software. We introduce a novel visualisation c...

RKB: A Knowledge base to support research documentation, data, GIS, spatial data and communications for a major rail freight project.

Conference Proceeding
Wigan, M., Kukla, R., Benjamins, M., & Grashoff, P. (2006)
RKB: A Knowledge base to support research documentation, data, GIS, spatial data and communications for a major rail freight project. In Proceedings of the European Transport Conference 2007
The paper places data and document access, use and exploration systems in the context of the Data Observatories movement, as well as the document repository systems now becomi...

Scientific names are ambiguous as identifiers for biological taxa: their context and definition are required for accurate data integration

Conference Proceeding
Kennedy, J., Kukla, R., & Paterson, T. (2005)
Scientific names are ambiguous as identifiers for biological taxa: their context and definition are required for accurate data integration. In B. Ludaescher, & L. Raschid (Eds.), Data Integration in the Life Sciences, 80-95. https://doi.org/10.1007/11530084_8
Biologists use scientific names to label the organisms described in their data; however, these names are not unique identifiers for taxonomic entities. Alternative taxonomic c...

A comparison of video and infrared based tracking of pedestrian movements.

Conference Proceeding
Kerridge, J., Kukla, R., Willis, A., Armitage, A., Binnie, D., & Lei, L. (2005)
A comparison of video and infrared based tracking of pedestrian movements. In S. P. Hoogendoom, S. Luding, P. H. L. Bovy, M. Schreckenberg, & D. E. Wolf (Eds.), Traffic and granular flow 03, 383-392. https://doi.org/10.1007/3-540-28091-X_37
We provide a comparison of the relative merits of video and infrared based methods for collecting pedestrian movements from the real world and also from experimental environme...

Converting an existing taxonomic data resource to employ an ontology and LSIDs.

Conference Proceeding
Kennedy, J., Gales, R., & Kukla, R. (2006)
Converting an existing taxonomic data resource to employ an ontology and LSIDs. In L. Belbin, A. Rissoné, & A. Weitzman (Eds.), Proceedings of TDWG (2006), St Louis, MI
Data sharing is fundamental to biodiversity and taxonomic data applications, however previous attempts at developing mechanisms to facilitate sharing within the community have...

MaTSE: The microarray time-series explorer

Conference Proceeding
Craig, P., Cannon, A., Kukla, R., & Kennedy, J. (2012)
MaTSE: The microarray time-series explorer. In 2012 IEEE Symposium on Biological Data Visualization (BioVis), (41-48). https://doi.org/10.1109/biovis.2012.6378591
This paper describes the design, development and evaluation of the Microarray Time-Series Explorer (MaTSE), a novel information visualization application for the exploratory a...

MaTSE: the gene expression time-series explorer.

Journal Article
Craig, P., Cannon, A., Kukla, R., & Kennedy, J. (2013)
MaTSE: the gene expression time-series explorer. BMC bioinformatics, 14, https://doi.org/10.1186/1471-2105-14-S19-S1
Background High throughput gene expression time-course experiments provide a perspective on biological functioning recognized as having huge value for the diagnosis, treatmen...

A standard data model representation for taxonomic information.

Journal Article
Kennedy, J., Hyam, R., Kukla, R., & Paterson, T. (2006)
A standard data model representation for taxonomic information. OMICS, 10, 220-230. doi:10.1089/omi.2006.10.220
The names used by biologists to label the observations they make are imprecise. This is an issue as workers increasingly seek to exploit data gathered from multiple, unrelated...

Developing a core ontology for taxonomic data.

Conference Proceeding
Kennedy, J., Gales, R., Hyam, R., Kukla, R., Wieczorek, J., Hagedorn, G., …Vieglais, D. (2006)
Developing a core ontology for taxonomic data. In L. Belbin, A. Rissoné, & A. Weitzman (Eds.), Proceedings of TDWG (2006), St Louis, MI
Over recent years several sub-groups within the Taxonomic Databases Working Group (TDWG) have developed models and exchange standards to facilitate data sharing within the tax...

Human movement behaviour in urban spaces: Implications for the design and modelling of effective pedestrian environments.

Journal Article
Willis, A., Gjersoe, N., Havard, C., Kerridge, J. & Kukla, R. (2004)
Human movement behaviour in urban spaces: Implications for the design and modelling of effective pedestrian environments. Environment and planning. B, Planning & design. 31, 805-828. doi:10.1068/b3060. ISSN 1472-3417
Despite a burgeoning research effort directed at the design and modelling of effective urban spaces for pedestrians, remarkably little is known about how pedestrians actually ...
22 results

Scottish Woodlands KTP

2013 - 2014
Scottish Woodlands Ltd is Scotland's leading independent full-service forest management company. It is also the second largest operator in the UK, with a network of 17 offices operating throughout Sco...
Funder: Innovate UK | Value: £110,222

SEEK: Science Environment for Ecological Knowledge

2002 - 2008
The goals of the project are to make fundamental improvements in how researchers can 1) gain global access to ecological data and information, 2) rapidly locate and utilize distributed computation...
Funder: National Science Foundation | Value: £348,305

MATSE: Information Visualisation of Microarray Time-course Data

2007 - 2009
Microarray Time-series Explorer (MaTSE) is a software application developed to improve the analysis of microarray data by allowing the user to explore their data using a unique visual interface.  Thro...
Funder: Scottish Enterprise | Value: £176,630

OPAL: The Partner Lens

2002 - 2004
OPaL aims to explore the potential of tools that can assist firms to configure partnerships as and when required to meet the demands of a volatile distributed workplace (Handy, 1992). Whatever the mot...
Funder: European Commission | Value: £194,000

Open Innovation and Business Networking Platform

2012 - 2012
IIDI worked with The Technology Club to develop an online business and innovation networking platform which matches Technology Exploiters with Technology Suppliers. The company now has a working vers...
Funder: Scottish Funding Council | Value: £4,991

Plansafe - Follow on voucher

2015 - 2016
This is a follow-on innovation voucher project to further develop a software system which will fully document Statutory Examinations of lifting, pressure and LEV equipment. The solution will involve a...
Funder: Scottish Funding Council | Value: £35,837

ASHS Interactive Journal

2015 - 2015
This project aims to produce a pilot mobile app for industry members making relevant content from ASHS's bi-annual print journal and related interactive tools available on gps enabled mobile...
Funder: Scottish Funding Council | Value: £5,000

The Extractive Components of UK Hardwood

2016 - 2017
Use the ITED system to search literature based observations about the chemical extractive components of both broadleaf and conifer tree species commonly grown in the UK. Chemically, wood structure ma...
Funder: Forestry Commission Scotland | Value: £28,492

TDWG Taxon Concept Transfer Schema

2004 - 2005
The Taxon Concept Modelling project is associated developing standard data models for representing taxonomic names and concepts for use in the biodiversity community. The work is associated with the T...
Funder: Taxonomic Databases Working Group ( Biodiversity Information Standards ) | Value: £60,000

TrueBuild Usable Building Regulations

2014 - 2015
The TrueBuild app is a resource delivered by Smart ‘Phone (either IOS or Android) to help builders access and interpret Building Regulations quickly and easily whilst on site.
Funder: Scottish Funding Council | Value: £5,000

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