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Evaluating the VIPER pedigree visualisation: detecting inheritance inconsistencies in genotyped pedigrees.

Conference Proceeding
Paterson, T., Graham, M., Kennedy, J., & Law, A. (2011)
Evaluating the VIPER pedigree visualisation: detecting inheritance inconsistencies in genotyped pedigrees. In 2011 IEEE Symposium on Biological Data Visualization (BioVis), 119-126. https://doi.org/10.1109/BioVis.2011.6094056
VIPER (Visual Pedigree Explorer) is a tool for exploring large complex animal pedigrees and their associated genotype data. The tool combines a novel, space-efficient visualis...

Extending taxonomic visualisation to incorporate synonymy and structural markers.

Journal Article
Graham, M., & Kennedy, J. (2005)
Extending taxonomic visualisation to incorporate synonymy and structural markers. Information Visualization, 4, 206-223. https://doi.org/10.1057/palgrave.ivs.9500096
The visualisation of taxonomic hierarchies has evolved from indented lists of names to techniques that can display thousands of nodes and onto hundreds of thousands of nodes o...

Combining linking and focusing techniques for a multiple hierarchy visualisation

Conference Proceeding
Graham, M., & Kennedy, J. (2002)
Combining linking and focusing techniques for a multiple hierarchy visualisation. In E. Banissi, F. Khosrowshahi, M. Sarfraz, & A. Ursyn (Eds.), Proceedings [of the] Fifth International Conference on Information Visualisation, 425-432. https://doi.org/10.1109/iv.2001.942092
Visualisations have previously combined linking and brushing operations successfully. However, none to our knowledge have combined linking and focussing techniques. We describ...

VIPER: a visualisation tool for exploring inheritance inconsistencies in genotyped pedigrees

Journal Article
Paterson, T., Graham, M., Kennedy, J., & Law, A. (2012)
VIPER: a visualisation tool for exploring inheritance inconsistencies in genotyped pedigrees. BMC Bioinformatics, 13/8, https://doi.org/10.1186/1471-2105-13-S8-S5
Pedigree genotype datasets are used for analysing genetic inheritance and to map genetic markers and traits. Such datasets consist of hundreds of related animals genotyped for...

Visualisation to Aid Biodiversity Studies through Accurate Taxonomic Reconciliation.

Conference Proceeding
Graham, M., Craig, P., & Kennedy, J. (2008)
Visualisation to Aid Biodiversity Studies through Accurate Taxonomic Reconciliation. In W. A. Gray, K. G. Jeffery, & J. Shao (Eds.), Proceedings of British National Conference on Database Systems: Sharing Data, Information and Knowledge, 280-291. https://doi.org/10.1007/978-3-540-70504-8_29
All aspects of organismal biology rely on the accurate identification of specimens described and observed. This is particularly important for ecological surveys of biodiversit...

Novel visualisation techniques for working with multiple, overlapping classification hierarchies

Journal Article
Graham, M., Watson, M. F., & Kennedy, J. (2002)
Novel visualisation techniques for working with multiple, overlapping classification hierarchies. Taxon, 51, 351-358
A Java-based program is presented that provides a visualisation tool for display of and comparison between classification hierarchies. Taxa, or groups of taxa, can be tracked ...

Managing social capital as knowledge management – some specification and representation issues.

Journal Article
Davenport, E., Graham, M., Kennedy, J., & Taylor, K. (2005)
Managing social capital as knowledge management – some specification and representation issues. Proceedings of the American Society for Information Science and Technology, 40, 101-108. doi:10.1002/meet.1450400113
‘Classic’ accounts of social capital have emerged in accounts of stable networks or institutional environments. These conditions do not apply in the case of many firms – a cas...

Exploring and examining assessment data via a matrix visualisation

Conference Proceeding
Graham, M., & Kennedy, J. (2004)
Exploring and examining assessment data via a matrix visualisation. In M. F. Costabile (Ed.), Advanced Visual Interfaces (AVI) 2004, 158-162. doi:10.1145/989863.989886
OPAL (Online PArtner Lens) is an application designed to match project requirements with suitable teams and individuals, and as part of its matching process features an evalua...

Exploring multiple trees through DAG representations

Journal Article
Graham, M., & Kennedy, J. (2007)
Exploring multiple trees through DAG representations. IEEE Transactions on Visualization and Computer Graphics, 13, 1294-1301. https://doi.org/10.1109/TVCG.2007.70556
We present a Directed Acyclic Graph visualisation designed to allow interaction with a set of multiple classification trees, specifically to find overlaps and differences betw...

Helium: visualization of large scale plant pedigrees.

Journal Article
Shaw, P., Graham, M., Kennedy, J., Milne, I., & Marshall, D. F. (2014)
Helium: visualization of large scale plant pedigrees. BMC Bioinformatics, 15, https://doi.org/10.1186/1471-2105-15-259
Plant breeders use an increasingly diverse range of data types to identify lines with desirable characteristics suitable to be taken forward in plant breeding programmes. Ther...