Research explorer tool

48 results

Animated interval scatter-plot views for the exploratory analysis of large scale microarray time-course data.

Journal Article
Craig, P., Kennedy, J., & Cumming, A. (2005)
Animated interval scatter-plot views for the exploratory analysis of large scale microarray time-course data. Information Visualization, 4, 149-163. doi:10.1057/palgrave.ivs.9500101
Microarray technologies are a relatively new development that allow biologists to monitor the activity of thousands of genes (normally around 8,000) in parallel across multipl...

Coordinated graph and scatter-plot views for the visual exploration of microarray time-series data

Conference Proceeding
Craig, P., & Kennedy, J. (2003)
Coordinated graph and scatter-plot views for the visual exploration of microarray time-series data. In IEEE Symposium on Information Visualization, 173-180. doi:10.1109/infvis.2003.1249023
Microarrays are a relatively new, high-throughput data acquisition technology for investigating biological phenomena at the micro-level. The product of microarray experiments ...

Coordinated parallel views for the exploratory analysis of microarray time-course data.

Conference Proceeding
Craig, P., Kennedy, J., & Cumming, A. (2005)
Coordinated parallel views for the exploratory analysis of microarray time-course data. https://doi.org/10.1109/CMV.2005.5
Microarray time-course data relate to the recorded activity of thousands of genes, in parallel, over multiple discrete points in time during a biological process. Existing tec...

Concept relationship editor: a visual interface to support the assertion of synonymy relationships between taxonomic classifications

Conference Proceeding
Craig, P., & Kennedy, J. (2008)
Concept relationship editor: a visual interface to support the assertion of synonymy relationships between taxonomic classifications. In K. Börner, M. Gröhn, J. Park, J. C. Roberts, M. T. Gröhn, & J. C. Roberts (Eds.), Proc. SPIE 6809, Visualization and Data Analysis 2008, 680906-680912. doi:10.1117/12.765540
An increasingly common approach being taken by taxonomists to define the relationships between taxa in alternative hierarchical classifications is to use a set-based notation ...

Combining linking and focusing techniques for a multiple hierarchy visualisation

Conference Proceeding
Graham, M., & Kennedy, J. (2002)
Combining linking and focusing techniques for a multiple hierarchy visualisation. In E. Banissi, F. Khosrowshahi, M. Sarfraz, & A. Ursyn (Eds.), Proceedings [of the] Fifth International Conference on Information Visualisation, 425-432. https://doi.org/10.1109/iv.2001.942092
Visualisations have previously combined linking and brushing operations successfully. However, none to our knowledge have combined linking and focussing techniques. We describ...

Pattern browsing and query adjustment for the exploratory analysis and cooperative visualisation of microarray time-course data.

Conference Proceeding
Craig, P., Cannon, A., Kennedy, J., & Kukla, R. (2010)
Pattern browsing and query adjustment for the exploratory analysis and cooperative visualisation of microarray time-course data. In Y. Luo (Ed.), Cooperative Design, Visualization, and Engineering, 199-206. https://doi.org/10.1007/978-3-642-16066-0_30
This paper presents work to support collaborative visualisation and data analysis in the microarray time-series explorer (MaTSE) software. We introduce a novel visualisation c...

Research directions in data wrangling: Visualizations and transformations for usable and credible data

Journal Article
Kandel, S., Heer, J., Plaisant, C., Kennedy, J., Ham, F. V., Riche, N. H., …Buono, P. (2011)
Research directions in data wrangling: Visualizations and transformations for usable and credible data. Information Visualization, Octobe, 271-288. https://doi.org/10.1177/1473871611415994
In spite of advances in technologies for working with data, analysts still spend an inordinate amount of time diagnosing data quality issues and manipulating data into a usabl...

Teallach — a flexible user-interface development environment for object database applications

Journal Article
Barclay, P. J., Griffiths, T., McKirdy, J., Kennedy, J., Cooper, R., Paton, N. W., & Gray, P. (2003)
Teallach — a flexible user-interface development environment for object database applications. Journal of Visual Languages and Computing, 14(1), 47-77. doi:10.1016/s1045-926x(02)00056-3
The Teallach project has adapted model-based user-interface development techniques to the systematic creation of user-interfaces for object-oriented database applications. Mod...

VIPER: a visualisation tool for exploring inheritance inconsistencies in genotyped pedigrees

Journal Article
Paterson, T., Graham, M., Kennedy, J., & Law, A. (2012)
VIPER: a visualisation tool for exploring inheritance inconsistencies in genotyped pedigrees. BMC Bioinformatics, 13/8, https://doi.org/10.1186/1471-2105-13-S8-S5
Pedigree genotype datasets are used for analysing genetic inheritance and to map genetic markers and traits. Such datasets consist of hundreds of related animals genotyped for...

Visualisation to Aid Biodiversity Studies through Accurate Taxonomic Reconciliation.

Conference Proceeding
Graham, M., Craig, P., & Kennedy, J. (2008)
Visualisation to Aid Biodiversity Studies through Accurate Taxonomic Reconciliation. In W. A. Gray, K. G. Jeffery, & J. Shao (Eds.), Proceedings of British National Conference on Database Systems: Sharing Data, Information and Knowledge, 280-291. https://doi.org/10.1007/978-3-540-70504-8_29
All aspects of organismal biology rely on the accurate identification of specimens described and observed. This is particularly important for ecological surveys of biodiversit...