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32 results

BayesPiles: Visualisation Support for Bayesian Network Structure Learning

Journal Article
Vogogias, A., Kennedy, J., Archambault, D., Bach, B., Smith, V. A., & Currant, H. (2018)
BayesPiles: Visualisation Support for Bayesian Network Structure Learning. ACM transactions on intelligent systems and technology, 10(1), 1-23. https://doi.org/10.1145/3230623
We address the problem of exploring, combining and comparing large collections of scored, directed networks for understanding inferred Bayesian networks used in biology. In th...

Pathways for Theoretical Advances in Visualization

Journal Article
Chen, M., Grinstein, G., Johnson, C. R., Kennedy, J., & Tory, M. (2017)
Pathways for Theoretical Advances in Visualization. IEEE Computer Graphics and Applications, 37(4), 103-112. https://doi.org/10.1109/MCG.2017.3271463
There is little doubt that having a theoretic foundation will benefit the field of visualization, including its main subfields: information visualization, scientific visualiza...

Constructing and Evaluating Visualisation Task Classifications: Process and Considerations

Journal Article
Kerracher, N., & Kennedy, J. (2019)
Constructing and Evaluating Visualisation Task Classifications: Process and Considerations. Computer Graphics Forum, 36(3), 47-59. https://doi.org/10.1111/cgf.13167
Categorising tasks is a common pursuit in the visualisation research community, with a wide variety of taxonomies, typologies, design spaces, and frameworks having been develo...

Animated interval scatter-plot views for the exploratory analysis of large scale microarray time-course data.

Journal Article
Craig, P., Kennedy, J., & Cumming, A. (2005)
Animated interval scatter-plot views for the exploratory analysis of large scale microarray time-course data. Information Visualization, 4, 149-163. doi:10.1057/palgrave.ivs.9500101
Microarray technologies are a relatively new development that allow biologists to monitor the activity of thousands of genes (normally around 8,000) in parallel across multipl...

MaTSE: the gene expression time-series explorer.

Journal Article
Craig, P., Cannon, A., Kukla, R., & Kennedy, J. (2013)
MaTSE: the gene expression time-series explorer. BMC bioinformatics, 14, https://doi.org/10.1186/1471-2105-14-S19-S1
Background High throughput gene expression time-course experiments provide a perspective on biological functioning recognized as having huge value for the diagnosis, treatmen...

Semantic integrity for persistent objects

Journal Article
Barclay, P. J., & Kennedy, J. (1992)
Semantic integrity for persistent objects. Information and Software Technology, 34(8), 533-541. https://doi.org/10.1016/0950-5849%2892%2990147-H
Modelling constructs for specifying semantic integrity are reviewed, and their implicit execution semantics discussed. An integrity mainte- nance model based on these construc...

Teallach: a model-based user interface development environment for object databases

Journal Article
Griffiths, T., Barclay, P. J., Paton, N. W., McKirdy, J., Kennedy, J., Gray, P., …Pinherio da Silva, P. (2001)
Teallach: a model-based user interface development environment for object databases. Interacting with Computers, 14(1), 31-68. doi:10.1016/s0953-5438(01)00042-x
Model-based user interface development environments show promise for improving the productivity of user-interface developers and possibly for improving the quality of develope...

Extending taxonomic visualisation to incorporate synonymy and structural markers.

Journal Article
Graham, M., & Kennedy, J. (2005)
Extending taxonomic visualisation to incorporate synonymy and structural markers. Information Visualization, 4, 206-223. https://doi.org/10.1057/palgrave.ivs.9500096
The visualisation of taxonomic hierarchies has evolved from indented lists of names to techniques that can display thousands of nodes and onto hundreds of thousands of nodes o...

Implementation of the Prometheus Taxonomic Model: a comparison of database models and query languages and an introduction to the Prometheus Object-Oriented Model.

Journal Article
Raguenaud, C., Pullan, M. R., Watson, M. F., Kennedy, J., Newman, M. F., & Barclay, P. J. (2002)
Implementation of the Prometheus Taxonomic Model: a comparison of database models and query languages and an introduction to the Prometheus Object-Oriented Model. Taxon, 51(1), 131-142. https://doi.org/10.2307/1554970
Types of databases commonly used for handling taxonomic data are compared. It is shown that none of the existing types of databases fully support the requirements of taxonomic...

The Prometheus Description Model: an examination of the taxonomic description-building process and its representation

Journal Article
Pullan, M. R., Armstrong, K. E., Paterson, T., Cannon, A., Kennedy, J. B., Watson, M. F., …Raguenaud, C. (2005)
The Prometheus Description Model: an examination of the taxonomic description-building process and its representation. Taxon, 54(3), 751-765. https://doi.org/10.2307/25065431
A model for representing taxonomic descriptive data is presented. The model has been developed in response to the growing requirement for the global exchange of descriptive da...